The SCN5A gene homepage

General information
Gene symbol SCN5A
Gene name sodium channel, voltage-gated, type V, alpha subunit
Chromosome 3
Chromosomal band p21
Imprinted -
Genomic reference NG_008934.1
Transcript reference NM_198056.2
Associated with diseases WD
Citation reference(s) Pan M et al, 2011
Zhang T et al, 2010
Refseq URL Coding DNA reference sequence
Curators (0) -
Total number of public variants reported 662
Unique public DNA variants reported 426
Individuals with public variants 0
Hidden variants -
Notes The protein encoded by this gene is an integral membrane protein and tetrodotoxin-resistant voltage-gated sodium channel subunit. This protein is found primarily in cardiac muscle and is responsible for the initial upstroke of the action potential in an electrocardiogram. Defects in this gene are a cause of long QT syndrome type 3 (LQT3), an autosomal dominant cardiac disease. Alternative splicing results in several transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
Also known as: HB1; HB2; HH1; IVF; VF1; HBBD; ICCD; LQT3; SSS1; CDCD2; CMD1E; CMPD2; PFHB1; Nav1.5
Date created May 04, 2013

Graphical displays and utilities
Graphs Graphs displaying summary information of all variants in the database »
UCSC Genome Browser Show variants in the UCSC Genome Browser (full view, compact view)
Ensembl Genome Browser Show variants in the Ensembl Genome Browser (full view, compact view)
NCBI Sequence Viewer Show distribution histogram of variants in the NCBI Sequence Viewer

Links to other resources
Homepage URL http://www.genomed.org/lovd3/genes/SCN5A
External URL scn5amut.htm
HGNC 10593
Entrez Gene 6331
PubMed articles SCN5A
OMIM - Gene 600163
OMIM - Diseases WD (wilson disease)
HGMD SCN5A
GeneCards SCN5A
GeneTests SCN5A


Active transcripts


ID     

Chr     

Name     

NCBI ID     

NCBI Protein ID     

DescendingVariants     
00000117 3 sodium channel, voltage-gated, type V, alpha subunit NM_198056.2 - 662


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