The MSH2 gene homepage

General information
Gene symbol MSH2
Gene name mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)
Chromosome 2
Chromosomal band p21
Imprinted -
Genomic reference NG_007110.2
Transcript reference NM_000251.1
Associated with diseases WD
Citation reference(s) Pan M et al, 2011
Zhang T et al, 2010
Refseq URL Coding DNA reference sequence
Curators (0) -
Total number of public variants reported 119
Unique public DNA variants reported 81
Individuals with public variants 0
Hidden variants -
Notes This locus is frequently mutated in hereditary nonpolyposis colon cancer (HNPCC). When cloned, it was discovered to be a human homolog of the E. coli mismatch repair gene mutS, consistent with the characteristic alterations in microsatellite sequences (RER+ phenotype) found in HNPCC. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2012]
Also known as: FCC1; COCA1; HNPCC; LCFS2; HNPCC1
Date created April 29, 2013

Graphical displays and utilities
Graphs Graphs displaying summary information of all variants in the database »
UCSC Genome Browser Show variants in the UCSC Genome Browser (full view, compact view)
Ensembl Genome Browser Show variants in the Ensembl Genome Browser (full view, compact view)
NCBI Sequence Viewer Show distribution histogram of variants in the NCBI Sequence Viewer

Links to other resources
Homepage URL http://www.genomed.org/lovd3/genes/MSH2
External URL Colon cancer gene variant databases
Mismatch Repair Genes Variant Database
HGNC 7325
Entrez Gene 4436
PubMed articles MSH2
OMIM - Gene 609309
OMIM - Diseases WD (wilson disease)
HGMD MSH2
GeneCards MSH2
GeneTests MSH2


Active transcripts


ID     

Chr     

Name     

NCBI ID     

NCBI Protein ID     

DescendingVariants     
00000089 2 mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) NM_000251.1 - 119


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